Cloud Environnemental au Bénéfice de l'Auvergne
Objectif : permettre de mieux comprendre les systèmes environnementaux, leurs évolutions dans le contexte du changement climatique global et leurs interactions avec les agroécosystèmes : impact des facteurs environnementaux sur les productions agricoles et inversement.
The goal of this study is to compare current micro-eukaryotic communities (ca. 2000) with communities from the end of the 19th century (ca. 1880) in 48 French lakes. High-throughput sequencing of 18S rDNA is used to reconstruct past micro-eukaryotic communities from ancient DNA stored in lake sediments. Sample: Top sample for lake Aydat (replicate 1)
| Catégories | inlandWaters biota |
| GEMET - INSPIRE themes, version 1.0 |  |
| GEMET | |
| Langue | |
| Indicateur de ressource unique | |
| Contraintes légales | Creative Commons Attribution-ShareAlike 4.0 International 4.0 License (CC BY SA 4.0, https://creativecommons.org/licenses/by-sa/4.0/). |
| Contact pour la ressource | 
- France, - -, France author : isabelle.domaizon@inrae.fr
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| Status |
| Système de coordonnées | EPSG:4326 |
| Généalogie | { dataset: { name: Lake Aydat, latitude: N45°39′51.3′′, decimal_latitude: 45.6642487, longitude: E2°59′9.1′′, decimal_longitude: 2.9858563, article: { citation: Keck F, Millet L, Debroas D, Etienne D, Galop D, Rius D, Domaizon I, Nat Commun, 2020, 11(1):3831, year: 2020, title: Assessing the response of micro-eukaryotic diversity to the Great Acceleration using lake sedimentary DNA, doi: 10.1038/s41467-020-17682-8, pmid: 32737305, authors: [ { rank: 1, name: keck, firstname: françois, }, { rank: 2, name: millet, firstname: laurent, }, { rank: 3, name: debroas, firstname: didier, }, { rank: 4, name: etienne, firstname: david, }, { rank: 5, name: galop, firstname: didier, }, { rank: 6, name: rius, firstname: damien, }, { rank: L, name: domaizon, firstname: isabelle, }, ], }, metadata: [ { name: Ecosystem type, value: Lake (ENVO:00000020), }, { name: Forward primer name, value: 960F, }, { name: Forward primer sequence, value: GGCTTAATTTGACTCAACRCG, }, { name: Reverse primer name, value: NSR1438, }, { name: Reverse primer sequence, value: GGGCATCACAGACCTGTTAT, }, { name: Sequencing technology, value: MiSeq, }, { name: Marker region, value: V7, }, { name: Microbial domain, value: Eukaryota, }, { name: Barcode gene marker, value: 18S, }, { name: Datatype, value: reads, }, { name: Country, value: France, }, { name: Repository, value: NCBI SRA, }, { name: Experiment_ID, value: ERX3659381, }, { name: Contact mail, value: isabelle.domaizon@inrae.fr, }, { name: -omic method, value: Metabarcoding, }, { name: Nucleic acid type, value: DNA, }, { name: Sample material, value: sediment (ENVO:00002007), }, { name: Experiment_ID, value: ERX3659382, }, { name: Experiment_ID, value: ERX3659383, }, { name: Experiment_ID, value: ERX3659384, }, { name: Run_ID, value: ERR3667849, }, { name: Run_ID, value: ERR3667850, }, { name: Run_ID, value: ERR3667851, }, { name: Run_ID, value: ERR3667852, }, ], }, } |
| Contact pour la ressource |
- France, - -, France author : isabelle.domaizon@inrae.fr
|
| Identifiant | 5b7b39cb-d89c-45fd-afd3-864f1c3eb6f7 |
| Ressource Identifiant | FR-2020-FreshOmics-LMGE-ERX3659381%20 |
| Parent Identifiant |